yneN [2018-02-23 18:58:00]

similar to thiol:disulfide interchange protein

locus: BSU18010

pI: 7.86

mw: 19.23 kDa

protein length: 170 aa

gene length: 510 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 2|Metabolism] → [category|SW 2.1|Electron transport and ATP synthesis] → [category|SW 2.1.4|Electron transport/ other/ based on similarity]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 1,929,481 → 1,929,993

Expression and Regulation

Operons

• genes: [gene|E15E9F88B0E03FE8834C646369D2F4B4E713EF41|citB]-[gene|50BBC8AB77B99B9FE5B8A8FE906D39DFEA4ED652|yneN]
  description: [Pubmed|22383849]

  sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|1310745], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

  regulatory mechanism

  • [protein|90ACE0DECA58D3C1A55E135120F7A0C1C920571C|CodY]: repression, [Pubmed|12591885], in [regulon|90ACE0DECA58D3C1A55E135120F7A0C1C920571C|CodY regulon]
  • [protein|FE15A41A58A8177280817CA3825764C39185021A|CcpC]: repression, (molecular inducer: citrate) [pubmed|10656796] [pubmed|12100558], in [regulon|FE15A41A58A8177280817CA3825764C39185021A|CcpC regulon]
  • [protein|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|CcpA]: repression, [Pubmed|12100558], in [regulon|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|CcpA regulon]

  regulation

  • expressed upon transition into the stationary phase ([protein|search|AbrB]) [Pubmed|12591885], indirect negative regulation by [protein|search|AbrB] [Pubmed|20817675]

Other regulations

• [protein|CE542AE1A32CCD1ABB259E6159F7A37A8078E189|FsrA]: translation repression, [Pubmed|18697947]

Biological materials

Mutant

• MGNA-B392 (yneN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1391 NBRP B. subtilis, Japan]
• 1A921 ( ''yneN''::''erm''), [Pubmed|15342593], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A921&Search=1A921 BGSC]
• BKE18010 (Δ[gene|50BBC8AB77B99B9FE5B8A8FE906D39DFEA4ED652|yneN]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18010 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATGCCACCTCCGCAGCA, downstream forward: _UP4_TAGATTCAGTTTTTTTTATA
• BKK18010 (Δ[gene|50BBC8AB77B99B9FE5B8A8FE906D39DFEA4ED652|yneN]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18010 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATGCCACCTCCGCAGCA, downstream forward: _UP4_TAGATTCAGTTTTTTTTATA

References

• 22383849,15342593